The download begins. Direct access to the beacon helps a great deal with the download time, compared to extranet speeds; frankly, even if the Archives had been publicly accessible, coming in person might have still been faster.
There's an over-layer, designed to be cracked into by inquisitive primitives and grant them the secrets of the Mass Effect and FTL. Then, much better secured, there's a layer of user data from the prothean scientists were assigned to observe the humans fifty thousand years ago, with notes on behavior, technological development, and how soon would be reasonable to fold them into the empire. Also in this layer are the interstellar beacon-to-beacon communication logs, including the message that called the scientists away from their work, and a final message warning that "the Reapers are coming" and putting the beacon to sleep.
All of this is encoded... confusingly. There is code involved, but the vast majority of the information on the secondary layer is composed of raw sensory data, formatted by and for the prothean brain, attached to the ternary digits by means unknown. A human might be able to comprehend a single message, if they could head off an aneurysm. But the full meaning of the Mars Archives has never been understood.